Nephrogenic Diabetes Insipidus (NDI) and Nephrogenic Syndrome of Inappropriate Antidiuresis (NSIAD) via the AVPR2 Gene
Summary and Pricing
Test Method
Exome Sequencing with CNV DetectionTest Code | Test Copy Genes | Test CPT Code | Gene CPT Codes Copy CPT Code | Base Price | |
---|---|---|---|---|---|
8907 | AVPR2 | 81404 | 81404,81479 | $990 | Order Options and Pricing |
Pricing Comments
Our favored testing approach is exome based NextGen sequencing with CNV analysis. This will allow cost effective reflexing to PGxome or other exome based tests. However, if full gene Sanger sequencing is desired for STAT turnaround time, insurance, or other reasons, please see link below for Test Code, pricing, and turnaround time information. If the Sanger option is selected, CNV detection may be ordered through Test #600.
An additional 25% charge will be applied to STAT orders. STAT orders are prioritized throughout the testing process.
Click here for costs to reflex to whole PGxome (if original test is on PGxome Sequencing platform).
Click here for costs to reflex to whole PGnome (if original test is on PGnome Sequencing platform).
The Sanger Sequencing method for this test is NY State approved.
For Sanger Sequencing click here.Turnaround Time
3 weeks on average for standard orders or 2 weeks on average for STAT orders.
Please note: Once the testing process begins, an Estimated Report Date (ERD) range will be displayed in the portal. This is the most accurate prediction of when your report will be complete and may differ from the average TAT published on our website. About 85% of our tests will be reported within or before the ERD range. We will notify you of significant delays or holds which will impact the ERD. Learn more about turnaround times here.
Targeted Testing
For ordering sequencing of targeted known variants, go to our Targeted Variants page.
Clinical Features and Genetics
Clinical Features
Nephrogenic Diabetes Insipidus (NDI) is a kidney disorder characterized by polyuria (too much urine) and polydipsia (excessive thirst), which results from an insensitivity to vasopressin (also called antidiuretic hormone, ADH), a hormone that regulates the kidneys to retain water.
Inherited NDI patients usually display early onset (< 1 year old), poor feeding, failure to thrive, fever and short stature, and are prone to severe dehydration trigged by illness, hot environments and water depletion. Inactivating mutations in the arginine vasopressin receptor gene (AVPR2) were shown to cause X-linked recessive NDI (OMIM#304800), which accounts for ~ 90% of inherited NDI, whereas activating mutations in the AVPR2 gene cause nephrogenic syndrome of inappropriate antidiuresis (NSIAD) (OMIM#300539), a rare disorder which can cause brain swelling and other serious complications due to low levels of salt in the blood (hyponatremia) (Knoers, GeneReview 2012; Bichet et al. Prog Mol Biol Transl Sci, 89:15-29, 2009). Recent data suggests that ~25% of females who are heterozygous carriers for AVPR2 causative gene mutations have NDI symptoms (Sasaki et al., 2012).
Genetics
Inherited NDI can be caused by mutations in the AVPR2 and AQP2 genes. AVPR2 (OMIM#300538) encodes arginine vasopressin receptor 2 (V2R), a member of G protein superfamily predominantly expressed in the kidney collecting ducts. Coupled with arginine vasopressin (AVP), V2R activates a series of reactions to regulate transepithelium water permeability in renal collecting tubes. This increases water reabsorption from urine and maintains body’s water homeostasis. To date, more than 200 causative mutations have been reported throughout the gene including missense (~50%), truncating, splice mutations, or large deletions encompassing the entire AVPR2 gene (Anesi et al, 2012). Missense mutations R137C or R137L were linked to NSIAD, while missense mutation R137H was found in classic NDI (Bichet et al, 2009).
Clinical Sensitivity - Sequencing with CNV PGxome
AVPR2 causative gene mutations can be detected by sequencing in about 95% of patients with clinically diagnosed X-linked Nephrogenic diabetes insipidus (Knoers, GeneReview 2012).
Approximately 8% of reported AVPR2 pathogenic variants are large deletions/duplications, which cannot be detected by Sanger Sequencing (Human Gene Mutation Database).
Testing Strategy
This test provides full coverage of all coding exons of the AVPR2 gene plus 10 bases of flanking noncoding DNA in all available transcripts along with other non-coding regions in which pathogenic variants have been identified at PreventionGenetics or reported elsewhere. We define full coverage as >20X NGS reads or Sanger sequencing. PGnome panels typically provide slightly increased coverage over the PGxome equivalent. PGnome sequencing panels have the added benefit of additional analysis and reporting of deep intronic regions (where applicable).
Dependent on the sequencing backbone selected for this testing, discounted reflex testing to any other similar backbone-based test is available (i.e., PGxome panel to whole PGxome; PGnome panel to whole PGnome).
Indications for Test
Candidates for this test are patients with symptoms consistent with X-linked Nephrogenic Diabetes Insipidus (NDI), Nephrogenic Syndrome of Inappropriate Antidiuresis (NSIAD) and the family members of patients who have known AVPR2 mutations.
Candidates for this test are patients with symptoms consistent with X-linked Nephrogenic Diabetes Insipidus (NDI), Nephrogenic Syndrome of Inappropriate Antidiuresis (NSIAD) and the family members of patients who have known AVPR2 mutations.
Gene
Official Gene Symbol | OMIM ID |
---|---|
AVPR2 | 300538 |
Inheritance | Abbreviation |
---|---|
Autosomal Dominant | AD |
Autosomal Recessive | AR |
X-Linked | XL |
Mitochondrial | MT |
Diseases
Name | Inheritance | OMIM ID |
---|---|---|
Diabetes Insipidus, Nephrogenic, X-Linked | XL | 304800 |
Nephrogenic Syndrome Of Inappropriate Antidiuresis | XL | 300539 |
Citations
Ordering/Specimens
Ordering Options
We offer several options when ordering sequencing tests. For more information on these options, see our Ordering Instructions page. To view available options, click on the Order Options button within the test description.
myPrevent - Online Ordering
- The test can be added to your online orders in the Summary and Pricing section.
- Once the test has been added log in to myPrevent to fill out an online requisition form.
- PGnome sequencing panels can be ordered via the myPrevent portal only at this time.
Requisition Form
- A completed requisition form must accompany all specimens.
- Billing information along with specimen and shipping instructions are within the requisition form.
- All testing must be ordered by a qualified healthcare provider.
For Requisition Forms, visit our Forms page
If ordering a Duo or Trio test, the proband and all comparator samples are required to initiate testing. If we do not receive all required samples for the test ordered within 21 days, we will convert the order to the most effective testing strategy with the samples available. Prior authorization and/or billing in place may be impacted by a change in test code.
Specimen Types
Specimen Requirements and Shipping Details
PGxome (Exome) Sequencing Panel
PGnome (Genome) Sequencing Panel
ORDER OPTIONS
View Ordering Instructions1) Select Test Type
2) Select Additional Test Options
No Additional Test Options are available for this test.