Bradyopsia (Retinal Dysfunction) via the RGS9BP Gene
Summary and Pricing
Test Method
Exome Sequencing with CNV DetectionTest Code | Test Copy Genes | Test CPT Code | Gene CPT Codes Copy CPT Code | Base Price | |
---|---|---|---|---|---|
13031 | RGS9BP | 81479 | 81479,81479 | $990 | Order Options and Pricing |
Pricing Comments
Our favored testing approach is exome based NextGen sequencing with CNV analysis. This will allow cost effective reflexing to PGxome or other exome based tests. However, if full gene Sanger sequencing is desired for STAT turnaround time, insurance, or other reasons, please see link below for Test Code, pricing, and turnaround time information.
An additional 25% charge will be applied to STAT orders. STAT orders are prioritized throughout the testing process.
Click here for costs to reflex to whole PGxome (if original test is on PGxome Sequencing platform).
Click here for costs to reflex to whole PGnome (if original test is on PGnome Sequencing platform).
The Sanger Sequencing method for this test is NY State approved.
For Sanger Sequencing click here.Turnaround Time
3 weeks on average for standard orders or 2 weeks on average for STAT orders.
Please note: Once the testing process begins, an Estimated Report Date (ERD) range will be displayed in the portal. This is the most accurate prediction of when your report will be complete and may differ from the average TAT published on our website. About 85% of our tests will be reported within or before the ERD range. We will notify you of significant delays or holds which will impact the ERD. Learn more about turnaround times here.
Targeted Testing
For ordering sequencing of targeted known variants, go to our Targeted Variants page.
Clinical Features and Genetics
Clinical Features
Bradyopsia or RGS9/R9AP-associated retinopathy is a rare retinal dysfunction characterized by reduced central vision from childhood due to cone dysfunction, mild photophobia, normal color vision, lack of nystagmus, normal fundi and distinctive electrophysiologic features (Michaelides et al. 2010. PubMed ID: 19818506). The chief complaint of all patients is difficulty tracking moving objects and adapting to sudden changes in luminance levels. Walking out of a house into the sunlight for example causes temporary severe blindness (Kooijman et al. 1991. PubMed ID: 1790747).
With the advent of gene therapy and other types of treatments, the identification of causative genes and variants is becoming increasingly important.
Genetics
Pathogenic variants in either RGS9 (encoding a GTPase-activating protein) or RGS9BP (encoding its membrane anchor protein) have been identified in patients with autosomal recessive bradyopsia or RGS9/RGS9BP-associated retinopathy (Strauss et al. 2015. PubMed ID: 26343007). Both genes play a critical role in the recovery phase of visual transduction (Strauss et al. 2015. PubMed ID: 26343007; Nishiguchi et al. 2004. PubMed ID: 14702087). To date, about 5 pathogenic variants (small deletions and duplications and an entire gene deletion) in RGS9BP have been connected to bradyopsia (Michaelides et al. 2010. PubMed ID: 19818506; Human Gene Mutation Database). De novo variants have not been reported in either RGS9 or RGS9BP.
In both RGS9 and R9AP knockout mice, a small delay was observed in ON-bipolar cell light responses manifested as delayed onset of electroretinography b-waves was. This is consistent with the prolonged electroretinal response suppression (PERRS) in the Bradyopsia patients (Herrmann et al. 2011. PubMed ID: 22096596; Kooijman et al. 1991. PubMed ID: 1790747).
Clinical Sensitivity - Sequencing with CNV PGxome
Predicting clinical sensitivity for the RGS9BP gene is challenging due to genetic heterogeneity and the limited number of cases.
Testing Strategy
This test is performed using Next-Gen sequencing with additional Sanger sequencing as necessary.
This test provides full coverage of the single coding exon of the RGS9BP gene plus 10 bases of flanking noncoding DNA in all available transcripts along with other non-coding regions in which pathogenic variants have been identified at PreventionGenetics or reported elsewhere. We define full coverage as >20X NGS reads or Sanger sequencing. PGnome panels typically provide slightly increased coverage over the PGxome equivalent. PGnome sequencing panels have the added benefit of additional analysis and reporting of deep intronic regions (where applicable).
Dependent on the sequencing backbone selected for this testing, discounted reflex testing to any other similar backbone-based test is available (i.e., PGxome panel to whole PGxome; PGnome panel to whole PGnome).
Indications for Test
All patients with symptoms suggestive of bradyopsia are candidates. The term was proposed due to the the patients’ difficulty in adapting to changes in luminance. Targeted testing is indicated for family members of patients who have known pathogenic variants in RGS9BP. This test may also be considered for the reproductive partners of individuals who carry pathogenic variants in RGS9BP.
All patients with symptoms suggestive of bradyopsia are candidates. The term was proposed due to the the patients’ difficulty in adapting to changes in luminance. Targeted testing is indicated for family members of patients who have known pathogenic variants in RGS9BP. This test may also be considered for the reproductive partners of individuals who carry pathogenic variants in RGS9BP.
Gene
Official Gene Symbol | OMIM ID |
---|---|
RGS9BP | 607814 |
Inheritance | Abbreviation |
---|---|
Autosomal Dominant | AD |
Autosomal Recessive | AR |
X-Linked | XL |
Mitochondrial | MT |
Disease
Name | Inheritance | OMIM ID |
---|---|---|
Prolonged Electroretinal Response Suppression | AR | 608415 |
Citations
Ordering/Specimens
Ordering Options
We offer several options when ordering sequencing tests. For more information on these options, see our Ordering Instructions page. To view available options, click on the Order Options button within the test description.
myPrevent - Online Ordering
- The test can be added to your online orders in the Summary and Pricing section.
- Once the test has been added log in to myPrevent to fill out an online requisition form.
- PGnome sequencing panels can be ordered via the myPrevent portal only at this time.
Requisition Form
- A completed requisition form must accompany all specimens.
- Billing information along with specimen and shipping instructions are within the requisition form.
- All testing must be ordered by a qualified healthcare provider.
For Requisition Forms, visit our Forms page
If ordering a Duo or Trio test, the proband and all comparator samples are required to initiate testing. If we do not receive all required samples for the test ordered within 21 days, we will convert the order to the most effective testing strategy with the samples available. Prior authorization and/or billing in place may be impacted by a change in test code.
Specimen Types
Specimen Requirements and Shipping Details
PGxome (Exome) Sequencing Panel
PGnome (Genome) Sequencing Panel
ORDER OPTIONS
View Ordering Instructions1) Select Test Type
2) Select Additional Test Options
No Additional Test Options are available for this test.